pathRender
This is the development version of pathRender; for the stable release version, see pathRender.
Render molecular pathways
Bioconductor version: Development (3.23)
build graphs from pathway databases, render them by Rgraphviz.
Author: Li Long <lilong at isb-sib.ch>
Maintainer: Vince Carey <stvjc at channing.harvard.edu>
Citation (from within R, enter
citation("pathRender")):
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("pathRender")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | GraphAndNetwork, Pathways, Software, Visualization |
| Version | 1.77.0 |
| In Bioconductor since | BioC 1.8 (R-2.3) (19.5 years) |
| License | LGPL |
| Depends | graph, Rgraphviz, RColorBrewer, cMAP, AnnotationDbi, methods, stats4 |
| Imports | |
| System Requirements | |
| URL | http://www.bioconductor.org |
See More
| Suggests | ALL, hgu95av2.db |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/pathRender |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/pathRender |
| Package Short Url | https://bioconductor.org/packages/pathRender/ |
| Package Downloads Report | Download Stats |