goSorensen

This is the development version of goSorensen; for the stable release version, see goSorensen.

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Bioconductor version: Development (3.23)

This package implements inferential methods to compare gene lists in terms of their biological meaning as expressed in the GO. The compared gene lists are characterized by cross-tabulation frequency tables of enriched GO items. Dissimilarity between gene lists is evaluated using the Sorensen-Dice index. The fundamental guiding principle is that two gene lists are taken as similar if they share a great proportion of common enriched GO items.

Author:

Maintainer: ERROR

Citation (from within R, enter citation("goSorensen")):

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("goSorensen")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation


Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	Software
Version	1.13.0
In Bioconductor since	BioC 3.16 (R-4.2) (3 years)
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Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary (x86_64)
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/goSorensen
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/goSorensen
Package Short Url	https://bioconductor.org/packages/goSorensen/
Package Downloads Report	Download Stats