seqCNA.annot
This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see seqCNA.annot.
Annotation for the copy number analysis of deep sequencing cancer data with seqCNA
Bioconductor version: 3.9
Provides annotation on GC content, mappability and genomic features for various genomes
Author: David Mosen-Ansorena
Maintainer: David Mosen-Ansorena <dmosen.gn at cicbiogune.es>
Citation (from within R, enter
citation("seqCNA.annot")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("seqCNA.annot")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | CopyNumberVariationData, ExperimentData, Genome |
| Version | 1.20.0 |
| License | GPL-3 |
| Depends | R (>= 2.10) |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | seqCNA |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | seqCNA.annot_1.20.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/seqCNA.annot |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/seqCNA.annot |
| Package Short Url | https://bioconductor.org/packages/seqCNA.annot/ |
| Package Downloads Report | Download Stats |