ccdata
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see ccdata.
Data for Combination Connectivity Mapping (ccmap) Package
Bioconductor version: 3.9
This package contains microarray gene expression data generated from the Connectivity Map build 02 and LINCS l1000. The data are used by the ccmap package to find drugs and drug combinations to mimic or reverse a gene expression signature.
Author: Alex Pickering
Maintainer: Alex Pickering <alexvpickering at gmail.com>
Citation (from within R, enter
citation("ccdata")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ccdata")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual | |
| LICENSE | Text |
Details
| biocViews | ExperimentData, ExpressionData, MicroarrayData |
| Version | 1.10.0 |
| License | MIT + file LICENSE |
| Depends | R (>= 3.3) |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | ccmap |
| Suggests Me | crossmeta |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | ccdata_1.10.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/ccdata |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/ccdata |
| Package Short Url | https://bioconductor.org/packages/ccdata/ |
| Package Downloads Report | Download Stats |