aracne.networks
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see aracne.networks.
ARACNe-inferred gene networks from TCGA tumor datasets
Bioconductor version: 3.9
This package contains ARACNe-inferred networks from TCGA tumor datasets. It also contains a function to export them into plain-text format.
Author: Federico M. Giorgi
Maintainer: Federico M. Giorgi <federico.giorgi at gmail.com>, Mariano Alvarez <reef103 at gmail.com>
citation("aracne.networks")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("aracne.networks")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("aracne.networks")| Using aracne.networks | R Script | |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | CancerData, ExperimentData, Genome, Homo_sapiens_Data |
| Version | 1.10.0 |
| License | file LICENSE |
| Depends | R (>= 3.3), viper |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | |
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| Enhances | |
| Depends On Me | |
| Imports Me | |
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| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | aracne.networks_1.10.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/aracne.networks |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/aracne.networks |
| Package Short Url | https://bioconductor.org/packages/aracne.networks/ |
| Package Downloads Report | Download Stats |