GGdata
This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see GGdata.
all 90 hapmap CEU samples, 47K expression, 4mm SNP
Bioconductor version: 3.9
data exemplars dealing with hapmap SNP reports, GWAS, etc.
Author: VJ Carey <stvjc at channing.harvard.edu>
Maintainer: VJ Carey <stvjc at channing.harvard.edu>
Citation (from within R, enter
citation("GGdata")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("GGdata")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | ExperimentData, Genome, HapMap, MicroarrayData, SNPData, SequencingData |
| Version | 1.22.0 |
| License | LGPL |
| Depends | R (>= 2.12.0), methods, Biobase(>= 2.5.5), GGBase, snpStats, illuminaHumanv1.db, AnnotationDbi |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | GGtools |
| Depends On Me | eQTL |
| Imports Me | |
| Suggests Me | crlmm, GGtools |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | GGdata_1.22.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/GGdata |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/GGdata |
| Package Short Url | https://bioconductor.org/packages/GGdata/ |
| Package Downloads Report | Download Stats |