DREAM4
This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see DREAM4.
Synthetic Expression Data for Gene Regulatory Network Inference from the 2009 DREAM4 challenge
Bioconductor version: 3.9
Simulated expression data for five 10-node, and five 100-node networks, with associated data (including solutions) from the 2009 DREAM4 challenge.
Author: Paul Shannon
Maintainer: Paul Shannon <pshannon at systemsbiology.org>
citation("DREAM4")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("DREAM4")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("DREAM4")| DREAM4 Overview | R Script | |
| DREAM4_InSilico_Description.pdf | ||
| Reference Manual |
Details
| biocViews | ExperimentData, Genome, Saccharomyces_cerevisiae_Data, SequencingData |
| Version | 1.20.0 |
| License | GPL |
| Depends | R (>= 2.15.1), SummarizedExperiment |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | RUnit, networkBMA |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | DREAM4_1.20.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/DREAM4 |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/DREAM4 |
| Package Short Url | https://bioconductor.org/packages/DREAM4/ |
| Package Downloads Report | Download Stats |