CHANGES IN VERSION 1.9.4
-------------------------
 o Update the parameters for new version of ggplot2
 
CHANGES IN VERSION 1.3.2
-------------------------
 o Update description file

CHANGES IN VERSION 1.3.1
-------------------------
 o Update the function labelRatio
 o Update the vignette

CHANGES IN VERSION 1.1.10
-------------------------
 o fixed typos in vignette 

CHANGES IN VERSION 1.1.9
------------------------
 o add function "proteinGroup"

CHANGES IN VERSION 1.1.8
------------------------
 o update function "chargeStat"
 o change file name

CHANGES IN VERSION 1.1.7
------------------------
 o add new function for calculation of labeling efficiency

CHANGES IN VERSION 1.1.6
------------------------
 o update vignette

CHANGES IN VERSION 1.1.5
------------------------
 o add function "chargeStat"

CHANGES IN VERSION 1.1.4
------------------------
 o fix several typos in vignette

CHANGES IN VERSION 1.1.3
------------------------
 o support MS/MS searching without modification

CHANGES IN VERSION 1.1.2
------------------------
 o change the figure of missed cleavages
 o fix several typos in vignette

CHANGES IN VERSION 1.1.1
------------------------
 o fix a minor bug

CHANGES IN VERSION 1.1.0
------------------------
 o support mz[X]ML format file
 o add identification-independent metrics

CHANGES IN VERSION 0.99.8
------------------------
 o change the head of input design file: mgf -> file

CHANGES IN VERSION 0.99.7
------------------------
 o Update unit test

CHANGES IN VERSION 0.99.6
------------------------
 o fix: Vignette sources in 'inst/doc' missing from the 'vignettes' directory

CHANGES IN VERSION 0.99.5
------------------------
 o fix a bug for qcHist
 o function "plotFractionIDResult" update

CHANGES IN VERSION 0.99.4
------------------------
 o add unit test

CHANGES IN VERSION 0.99.3
------------------------
 o Most of the figures re-ploted using ggplot2

CHANGES IN VERSION 0.99.2
------------------------
 o package version numbering
 o format NEWS file
 o remove README.md file
 o removed most of the unused commented code

CHANGES IN VERSION 0.99.1
------------------------
 o Format the code

CHANGES IN VERSION 0.99.0
------------------------
 o updated DESCRIPTION: version, biocViews, VignetteBuilder
 o initial draft of vignette 
 o msQCres S3 class and print method
 o msQCres saved in outdir
 o reportHTML can take msQCres of MsmqC dir 
 o new loadmsQCres function 
 o reduced example data 
 o using PXD000864 in vignette 
 o updating NAMESPACE