ternarynet
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see ternarynet.
Ternary Network Estimation
Bioconductor version: 3.9
A computational Bayesian approach to ternary gene regulatory network estimation from gene perturbation experiments.
Author: Matthew N. McCall <mccallm at gmail.com>, Anthony Almudevar <Anthony_Almudevar at urmc.rochester.edu>, David Burton <David_Burton at urmc.rochester.edu>, Harry Stern <harry.stern at rochester.edu>
Maintainer: Matthew N. McCall <mccallm at gmail.com>
citation("ternarynet")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ternarynet")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ternarynet")| ternarynet: A Computational Bayesian Approach to Ternary Network Estimation | R Script | |
| Reference Manual |
Details
| biocViews | CellBiology, GraphAndNetwork, Software |
| Version | 1.28.0 |
| In Bioconductor since | BioC 2.10 (R-2.15) (12 years) |
| License | GPL (>= 2) |
| Depends | R (>= 2.10.0), methods |
| Imports | utils, igraph |
| System Requirements | |
| URL |
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| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | ternarynet_1.28.0.tar.gz |
| Windows Binary | ternarynet_1.28.0.zip |
| Mac OS X 10.11 (El Capitan) | ternarynet_1.28.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/ternarynet |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/ternarynet |
| Bioc Package Browser | https://code.bioconductor.org/browse/ternarynet/ |
| Package Short Url | https://bioconductor.org/packages/ternarynet/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |