qpcrNorm

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see qpcrNorm.

Data-driven normalization strategies for high-throughput qPCR data.

Bioconductor version: 3.9

The package contains functions to perform normalization of high-throughput qPCR data. Basic functions for processing raw Ct data plus functions to generate diagnostic plots are also available.

Author: Jessica Mar

Maintainer: Jessica Mar <jess at jimmy.harvard.edu>

Citation (from within R, enter citation("qpcrNorm")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("qpcrNorm")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("qpcrNorm")

qPCR Normalization Example	PDF	R Script
Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	GeneExpression, Preprocessing, Software
Version	1.42.0
In Bioconductor since	BioC 2.4 (R-2.9) (15 years)
License	LGPL (>= 2)
Depends	methods, Biobase, limma, affy
Imports
System Requirements
URL

Suggests
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me	EasyqpcR
Links To Me
Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	qpcrNorm_1.42.0.tar.gz
Windows Binary	qpcrNorm_1.42.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan)	qpcrNorm_1.42.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/qpcrNorm
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/qpcrNorm
Bioc Package Browser	https://code.bioconductor.org/browse/qpcrNorm/
Package Short Url	https://bioconductor.org/packages/qpcrNorm/
Package Downloads Report	Download Stats
Old Source Packages for BioC 3.9	Source Archive