pkgDepTools
This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see pkgDepTools.
Package Dependency Tools
Bioconductor version: 3.9
This package provides tools for computing and analyzing dependency relationships among R packages. It provides tools for building a graph-based representation of the dependencies among all packages in a list of CRAN-style package repositories. There are also utilities for computing installation order of a given package. If the RCurl package is available, an estimate of the download size required to install a given package and its dependencies can be obtained.
Author: Seth Falcon [aut], Bioconductor Package Maintainer [cre]
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
citation("pkgDepTools")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("pkgDepTools")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("pkgDepTools")| How to Use pkgDepTools | R Script | |
| Reference Manual |
Details
| biocViews | GraphAndNetwork, Infrastructure, Software |
| Version | 1.50.0 |
| In Bioconductor since | BioC 1.9 (R-2.4) (17.5 years) |
| License | GPL-2 |
| Depends | methods, graph, RBGL |
| Imports | graph, RBGL |
| System Requirements | |
| URL |
See More
| Suggests | Biobase, Rgraphviz, RCurl, BiocManager |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | pkgDepTools_1.50.0.tar.gz |
| Windows Binary | pkgDepTools_1.50.0.zip (32- & 64-bit) |
| Mac OS X 10.11 (El Capitan) | pkgDepTools_1.50.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/pkgDepTools |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/pkgDepTools |
| Bioc Package Browser | https://code.bioconductor.org/browse/pkgDepTools/ |
| Package Short Url | https://bioconductor.org/packages/pkgDepTools/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |