meshr
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see meshr.
Tools for conducting enrichment analysis of MeSH
Bioconductor version: 3.9
A set of annotation maps describing the entire MeSH assembled using data from MeSH.
Author: Koki Tsuyuzaki, Itoshi Nikaido, Gota Morota
Maintainer: Koki Tsuyuzaki <k.t.the-answer at hotmail.co.jp>
Citation (from within R, enter
citation("meshr")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("meshr")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("meshr")| MeSH.db | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | Annotation, AnnotationData, Bioinformatics, FunctionalAnnotation, MeSHDb, MultipleComparisons, Software, Statistics |
| Version | 1.20.0 |
| In Bioconductor since | BioC 2.14 (R-3.1) (10 years) |
| License | Artistic-2.0 |
| Depends | R (>= 3.0.1) |
| Imports | methods, stats, utils, fdrtool, MeSH.db, MeSH.AOR.db, MeSH.PCR.db, MeSHDbi, MeSH.Hsa.eg.db, MeSH.Aca.eg.db, MeSH.Bsu.168.eg.db, MeSH.Syn.eg.db, cummeRbund, org.Hs.eg.db, Category, S4Vectors, BiocGenerics, RSQLite |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | scTensor |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | meshr_1.20.0.tar.gz |
| Windows Binary | meshr_1.20.0.zip |
| Mac OS X 10.11 (El Capitan) | meshr_1.20.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/meshr |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/meshr |
| Bioc Package Browser | https://code.bioconductor.org/browse/meshr/ |
| Package Short Url | https://bioconductor.org/packages/meshr/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |