frma
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see frma.
Frozen RMA and Barcode
Bioconductor version: 3.9
Preprocessing and analysis for single microarrays and microarray batches.
Author: Matthew N. McCall <mccallm at gmail.com>, Rafael A. Irizarry <rafa at jhu.edu>, with contributions from Terry Therneau
Maintainer: Matthew N. McCall <mccallm at gmail.com>
Citation (from within R, enter
citation("frma")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("frma")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("frma")| frma: Preprocessing for single arrays and array batches | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | Microarray, Preprocessing, Software |
| Version | 1.36.0 |
| In Bioconductor since | BioC 2.6 (R-2.11) (14 years) |
| License | GPL (>= 2) |
| Depends | R (>= 2.10.0), Biobase(>= 2.6.0) |
| Imports | Biobase, MASS, DBI, affy, methods, oligo, oligoClasses, preprocessCore, utils, BiocGenerics |
| System Requirements | |
| URL | http://bioconductor.org |
See More
| Suggests | hgu133afrmavecs, frmaExampleData |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | ChIPXpress, DeSousa2013, rat2302frmavecs |
| Suggests Me | antiProfilesData, frmaTools |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | frma_1.36.0.tar.gz |
| Windows Binary | frma_1.36.0.zip |
| Mac OS X 10.11 (El Capitan) | frma_1.36.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/frma |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/frma |
| Bioc Package Browser | https://code.bioconductor.org/browse/frma/ |
| Package Short Url | https://bioconductor.org/packages/frma/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |