apComplex
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see apComplex.
Estimate protein complex membership using AP-MS protein data
Bioconductor version: 3.9
Functions to estimate a bipartite graph of protein complex membership using AP-MS data.
Author: Denise Scholtens <dscholtens at northwestern.edu>
Maintainer: Denise Scholtens <dscholtens at northwestern.edu>
Citation (from within R, enter
citation("apComplex")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("apComplex")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("apComplex")| apComplex | R Script | |
| Reference Manual |
Details
| biocViews | GraphAndNetwork, ImmunoOncology, MassSpectrometry, NetworkInference, Software |
| Version | 2.50.0 |
| In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 19 years) |
| License | LGPL |
| Depends | R (>= 2.10), graph, RBGL |
| Imports | Rgraphviz, stats, org.Sc.sgd.db |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | ScISI |
| Imports Me | |
| Suggests Me | BiocCaseStudies |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | apComplex_2.50.0.tar.gz |
| Windows Binary | apComplex_2.50.0.zip |
| Mac OS X 10.11 (El Capitan) | apComplex_2.50.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/apComplex |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/apComplex |
| Bioc Package Browser | https://code.bioconductor.org/browse/apComplex/ |
| Package Short Url | https://bioconductor.org/packages/apComplex/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |