KCsmart
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see KCsmart.
Multi sample aCGH analysis package using kernel convolution
Bioconductor version: 3.9
Multi sample aCGH analysis package using kernel convolution
Author: Jorma de Ronde, Christiaan Klijn, Arno Velds
Maintainer: Jorma de Ronde <j.d.ronde at nki.nl>
Citation (from within R, enter
citation("KCsmart")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("KCsmart")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("KCsmart")| KCsmart example session | R Script | |
| Reference Manual |
Details
| biocViews | CopyNumberVariation, Microarray, Software, Visualization, aCGH |
| Version | 2.42.0 |
| In Bioconductor since | BioC 2.3 (R-2.8) (15.5 years) |
| License | GPL-3 |
| Depends | siggenes, multtest, KernSmooth |
| Imports | methods, BiocGenerics |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | Biobase, CGHbase |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | KCsmart_2.42.0.tar.gz |
| Windows Binary | KCsmart_2.42.0.zip |
| Mac OS X 10.11 (El Capitan) | KCsmart_2.42.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/KCsmart |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/KCsmart |
| Bioc Package Browser | https://code.bioconductor.org/browse/KCsmart/ |
| Package Short Url | https://bioconductor.org/packages/KCsmart/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |