FamAgg
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see FamAgg.
Pedigree Analysis and Familial Aggregation
Bioconductor version: 3.9
Framework providing basic pedigree analysis and plotting utilities as well as a variety of methods to evaluate familial aggregation of traits in large pedigrees.
Author: J. Rainer, D. Taliun, C.X. Weichenberger
Maintainer: Johannes Rainer <johannes.rainer at eurac.edu>
citation("FamAgg")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("FamAgg")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("FamAgg")| Pedigree Analysis and Familial Aggregation | HTML | R Script |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | Genetics, Software |
| Version | 1.12.0 |
| In Bioconductor since | BioC 3.3 (R-3.3) (8 years) |
| License | MIT + file LICENSE |
| Depends | methods, kinship2, igraph |
| Imports | gap (>= 1.1-17), Matrix, BiocGenerics, utils, survey |
| System Requirements | |
| URL | https://github.com/EuracBiomedicalResearch/FamAgg |
| Bug Reports | https://github.com/EuracBiomedicalResearch/FamAgg/issues |
See More
| Suggests | BiocStyle, knitr, RUnit, rmarkdown |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | FamAgg_1.12.0.tar.gz |
| Windows Binary | FamAgg_1.12.0.zip (32- & 64-bit) |
| Mac OS X 10.11 (El Capitan) | FamAgg_1.12.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/FamAgg |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/FamAgg |
| Bioc Package Browser | https://code.bioconductor.org/browse/FamAgg/ |
| Package Short Url | https://bioconductor.org/packages/FamAgg/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |