prot2D
This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.
This package is for version 3.8 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see prot2D.
Statistical Tools for volume data from 2D Gel Electrophoresis
Bioconductor version: 3.8
The purpose of this package is to analyze (i.e. Normalize and select significant spots) data issued from 2D GEl experiments
Author: Sebastien Artigaud
Maintainer: Sebastien Artigaud <sebastien.artigaud at gmx.com>
citation("prot2D")):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("prot2D")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("prot2D")| prot2D | R Script | |
| Reference Manual |
Details
| biocViews | DifferentialExpression, MultipleComparison, Proteomics, Software |
| Version | 1.20.0 |
| In Bioconductor since | BioC 2.13 (R-3.0) (10.5 years) |
| License | GPL (>= 2) |
| Depends | R (>= 2.15), fdrtool, st, samr, Biobase, limma, Mulcom, impute, MASS, qvalue |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | made4, affy |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | prot2D_1.20.0.tar.gz |
| Windows Binary | prot2D_1.20.0.zip |
| Mac OS X 10.11 (El Capitan) | prot2D_1.20.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/prot2D |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/prot2D |
| Package Short Url | https://bioconductor.org/packages/prot2D/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.8 | Source Archive |