LMGene
This package is for version 3.8 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see LMGene.
LMGene Software for Data Transformation and Identification of Differentially Expressed Genes in Gene Expression Arrays
Bioconductor version: 3.8
LMGene package for analysis of microarray data using a linear model and glog data transformation
Author: David Rocke, Geun Cheol Lee, John Tillinghast, Blythe Durbin-Johnson, and Shiquan Wu
Maintainer: Blythe Durbin-Johnson <bpdurbin at ucdavis.edu>
citation("LMGene")):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("LMGene")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("LMGene")| LMGene User's Guide | R Script | |
| Reference Manual |
Details
| biocViews | DifferentialExpression, Microarray, Preprocessing, Software |
| Version | 2.38.0 |
| In Bioconductor since | BioC 1.8 (R-2.3) (18 years) |
| License | LGPL |
| Depends | R (>= 2.10.0), Biobase(>= 2.5.5), multtest, survival, affy |
| Imports | |
| System Requirements | |
| URL | http://dmrocke.ucdavis.edu/software.html |
See More
| Suggests | affydata |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | LMGene_2.38.0.tar.gz |
| Windows Binary | LMGene_2.38.0.zip |
| Mac OS X 10.11 (El Capitan) | LMGene_2.38.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/LMGene |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/LMGene |
| Bioc Package Browser | https://code.bioconductor.org/browse/LMGene/ |
| Package Short Url | https://bioconductor.org/packages/LMGene/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.8 | Source Archive |