msqc1
This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see msqc1.
Sigma mix MSQC1 data
Bioconductor version: 3.7
The data set contains an eight technical replicate data set and a three replicate dilution series of the MS Qual/Quant QC Mix standard sample (Sigma-Aldrich, Buchs, Switzerland) measured on five different mass spec platforms at the Functional Genomics Center Zurich.
Author: Tobias Kockmann, Christian Trachsel, Christian Panse
Maintainer: Christian Panse <cp at fgcz.ethz.ch>
citation("msqc1")):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("msqc1")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("msqc1")| ASMS 2016 poster (in portrait) abstract ID number: 282492 | R Script | |
| Introducing msqc1 - A Mass Spec Data set for Targeted Proteomics Performance Evaluation | HTML | R Script |
| LC Observations - Retention Time Stability | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | ExperimentData, MassSpectrometryData, ReproducibleResearch |
| Version | 1.8.0 |
| License | GPL |
| Depends | R (>= 3.2), lattice, stats, utils |
| Imports | |
| System Requirements | |
| URL | https://panoramaweb.org/labkey/MSQC1.url http://fgcz-bfabric.uzh.ch/bfabric/project.html?projectId=1959 |
See More
| Suggests | BiocStyle, knitr, testthat, specL |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | specL |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | msqc1_1.8.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/msqc1 |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/msqc1 |
| Package Short Url | https://bioconductor.org/packages/msqc1/ |
| Package Downloads Report | Download Stats |