ceu1kg
This package is for version 3.7 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see ceu1kgv.
CEU (N=60) genotypes from 1000 genomes pilot phase I
Bioconductor version: 3.7
CEU genotypes from 1000 genomes "low coverage" pilot phase I (approx 8 million SNP calls released July 2010); includes Wellcome trust GENEVAR expression for 43 indiv
Author: VJ Carey <stvjc at channing.harvard.edu>
Maintainer: VJ Carey <stvjc at channing.harvard.edu>
citation("ceu1kg")):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ceu1kg")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ceu1kg")| ceu1kg overview | R Script | |
| Reference Manual |
Details
| biocViews | ExperimentData, HapMap, Project1000genomes, SNPData |
| Version | 0.18.0 |
| License | Artistic-2.0 |
| Depends | R (>= 2.12.0), GGBase(>= 3.9.0), GGtools, Biobase |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | SNPlocs.Hsapiens.dbSNP.20101109 |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | ceu1kg_0.18.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/ceu1kg |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/ceu1kg |
| Package Short Url | https://bioconductor.org/packages/ceu1kg/ |
| Package Downloads Report | Download Stats |