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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("PCHiCdata")
In most cases, you don't need to download the package archive at all.
PCHiCdata
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Promoter Capture Hi-C data
Bioconductor version: Release (3.5)
Subsets of Promoter Capture Hi-C data conveniently packaged for Chicago users. Data includes interactions detected for chromosomes 20 and 21 in GM12878 cells and for chromosomes 18 and 19 in mESC.
Author: Paula Freire-Pritchett, Jonathan Cairns, Steven Wingett, Mikhail Spivakov
Maintainer: Paula Freire-Pritchett <paula.freire-pritchett at babraham.ac.uk>
Citation (from within R,
enter citation("PCHiCdata")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("PCHiCdata")
Documentation
| HTML | R Script | PCHiCdata Vignette |
| Reference Manual |
Details
| biocViews | ExperimentData, Homo_sapiens_Data, Mus_musculus_Data, SequencingData, StemCell |
| Version | 1.4.0 |
| License | Artistic-2.0 |
| Depends | R (>= 3.2), Chicago |
| Imports | |
| LinkingTo | |
| Suggests | testthat, BiocStyle, knitr |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | Chicago |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | PCHiCdata_1.4.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/PCHiCdata |
| Package Short Url | http://bioconductor.org/packages/PCHiCdata/ |
| Package Downloads Report | Download Stats |
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