To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("motifRG")

In most cases, you don't need to download the package archive at all.

motifRG

A package for discriminative motif discovery, designed for high throughput sequencing dataset

Bioconductor version: Release (3.5)

Tools for discriminative motif discovery using regression methods

Author: Zizhen Yao

Maintainer: Zizhen Yao <yzizhen at fhcrc.org>

Citation (from within R, enter citation("motifRG")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("motifRG")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("motifRG")

PDF	R Script	motifRG: regression-based discriminative motif discovery
PDF		Reference Manual

biocViews	MotifDiscovery, Software, Transcription
Version	1.20.0
In Bioconductor since	BioC 2.10 (R-2.15) (5.5 years)
License	Artistic-2.0
Depends	R (>= 2.15), Biostrings(>= 2.26), IRanges, seqLogo, parallel, methods, grid, graphics, BSgenome, XVector, BSgenome.Hsapiens.UCSC.hg19
Imports	Biostrings, IRanges, seqLogo, parallel, methods, grid, graphics, XVector
LinkingTo
Suggests
SystemRequirements
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URL
Depends On Me	RCAS
Imports Me
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Build Report

Follow Installation instructions to use this package in your R session.

Source Package	motifRG_1.20.0.tar.gz
Windows Binary	motifRG_1.20.0.zip
Mac OS X 10.11 (El Capitan)	motifRG_1.20.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/motifRG
Package Short Url	http://bioconductor.org/packages/motifRG/
Package Downloads Report	Download Stats

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