- Home
- Bioconductor 3.5
- Software Packages
- RUVnormalize
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RUVnormalize")
In most cases, you don't need to download the package archive at all.
RUVnormalize
|
|
|
|
|
RUV for normalization of expression array data
Bioconductor version: Release (3.5)
RUVnormalize is meant to remove unwanted variation from gene expression data when the factor of interest is not defined, e.g., to clean up a dataset for general use or to do any kind of unsupervised analysis.
Author: Laurent Jacob
Maintainer: Laurent Jacob <laurent.jacob at univ-lyon1.fr>
Citation (from within R,
enter citation("RUVnormalize")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RUVnormalize")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("RUVnormalize")
| R Script | RUVnormalize | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | Normalization, Software, StatisticalMethod |
| Version | 1.10.0 |
| In Bioconductor since | BioC 3.0 (R-3.1) (3 years) |
| License | GPL-3 |
| Depends | R (>= 2.10.0) |
| Imports | RUVnormalizeData, Biobase |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | spams |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | RUVnormalize_1.10.0.tar.gz |
| Windows Binary | RUVnormalize_1.10.0.zip |
| Mac OS X 10.11 (El Capitan) | RUVnormalize_1.10.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/RUVnormalize |
| Package Short Url | http://bioconductor.org/packages/RUVnormalize/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
