98d1ea1fdbc2c87c0affd0e9023240dd *DESCRIPTION
1b9df3bf4b6399a601b0237584cc736a *NAMESPACE
ac287fd836b0dc4138d41d692320cca8 *R/AllClasses.R
76998f61573d01a471982f67ff983b2b *R/AllGenerics.R
90e59a07033314e1af54ccb496e08a02 *R/bayesMixModel.R
d29f8076acdea0fd353a8ac8f2a39b37 *R/calculateCrossCorrelation.R
5b5a4d2dad1b6a741e682e20ebd67c36 *R/getAlignmentQuality.R
0bca84e81523143e4976e8020daceaa2 *R/integrateData.R
c28c4207a5a7b26d092c0df2850e4f87 *R/matchProbeToPromoter.R
5c189179e32ccd3455ccb46fa76f2e16 *R/methods-ChIPseqSet.R
a3f0290c0c92d3a55025df0232688bfa *R/methods-MixModel.R
2f8d5919ecf87394fbd004737bb80a58 *R/methods-MixtureComponent.R
d4eb87863e73d98ac11f06216f9dd293 *R/mlMixModel.R
14cc9997b445eba05179d857b77034d7 *R/normalize.R
694d2e12144b8d9e33be5d849c96b72d *R/normalizeChIP.R
b713a67c06e3eb8a8e51ab02e31eb560 *R/plotChains.R
28bbd1fdccd005a0b404880af450c20b *R/plotClassification.R
b692ccd8a31915c342d60fd367e6f407 *R/plotComponents.R
fcdc5cfbcd4eadcd9fbb898d0e868052 *R/summarizeReads.R
6f95964784af11bef97d87454a06dc11 *build/vignette.rds
471404eb1418ed5bc055799d66f96623 *data/eSet.RData
0de9d9b99afb6e378b19772a1622155e *data/fpkm.RData
2dc95e7da016f9962998777711562a96 *data/mappedReads.RData
d5442349c7db2eb86eae62a2a963349a *data/transToTSS.RData
eea4571e2175e7c658d9048ac2f05839 *inst/CITATION
790e9bed6ad907a4842adf338d59c8db *inst/doc/epigenomix.R
0a3aa13ac0a4f7c11f0b423cfb0abbcd *inst/doc/epigenomix.Rnw
29941748f8ab1d26d66e75ca3b05c3d5 *inst/doc/epigenomix.pdf
682f2f2f6c5d06c7141dbb217d45f222 *man/ChIPseqSet-class.Rd
9b8f383b3befc18025eb1dc58ed7690b *man/MixModel-class.Rd
93caf83168a5041e5b57509fe964307e *man/MixModelBayes-class.Rd
1ff7cf574faeb6c144fa40368c47eb5c *man/MixModelML-class.Rd
ca894a7c832fa1c663f4ea9458a5801d *man/MixtureComponent-class.Rd
0cb5ee18209aa2932bf5850c94419448 *man/bayesMixModel.Rd
2d774757cfe6376198581632a9aca8f1 *man/calculateCrossCorrelation.Rd
56e215ef6c5894b59eb834c23b457331 *man/eSet.Rd
4d1447c02cbed2d72de2ce257fd1e2ad *man/fpkm.Rd
4d5b4999df0bb875eeb288f5f50502cf *man/getAlignmentQuality.Rd
2f6051c7410e46585d056c31844e1f51 *man/integrateData.Rd
8026ba0006cd6947bad3254e78b70ced *man/mappedReads.Rd
d6177c3ecb4f02dc59466df29ea07b6f *man/matchProbeToPromoter.Rd
ca74917b5edf765f6357ab9d04456f10 *man/mlMixModel.Rd
01744afc2bb5f36ac34507539423479a *man/normalize.Rd
0af4c16333bccc522fdd71b1155e53ab *man/normalizeChIP.Rd
ae612400d3187896c03e54d6ef0c3ce3 *man/plotChains.Rd
707e536fe7a0c4f9e28ab8a28cd1d641 *man/plotClassification.Rd
d6f6c15efe0b2c95e9833fa71e5cf589 *man/plotComponents.Rd
2f93ba79c86719d385722f6ed44c45d8 *man/summarizeReads.Rd
67bd884f8ce1c371db4f56ea59e6a4ac *man/transToTSS.Rd
0a3aa13ac0a4f7c11f0b423cfb0abbcd *vignettes/epigenomix.Rnw
2a6658bb5ce5f48a7baa1f6640f7d005 *vignettes/epigenomix.bib
8a5ad410844b8f334847b40353467211 *vignettes/unsrturl.bst
