6f6071f30260779e8bf4d1a46ae852db *DESCRIPTION
35112cc0a4a20c2c6df8b4949e116838 *LICENSE
b0abe81d52fc5edc093c6a16db32da7e *NAMESPACE
6913750396c3930c6f495cd540134861 *NEWS
5b3a9f616d087c493bd22995afc5ff88 *R/CRC_abd-data.R
3046a281401cfe394520b0c60f52f690 *R/CRC_meta-data.R
ad5d2236a612337fdfdf42d6b5281b26 *R/adjust_batch.R
adfedea94ee02f42c33bee7c6083a3ea *R/continuous_discover.R
70d154020c4ef65905cba98f90f62cf9 *R/controls.R
2a17b8a6a546f909bde0cf3fbaca53af *R/discrete_discover.R
9067bbf5e15fd369f142a1d789056167 *R/helpers.R
693fab7a639c3b900c198ef7675f5038 *R/helpers_adjust_batch.R
d118b98b571974aae311cf46a9e11645 *R/helpers_continuous_discover.R
0607bd533d0c023fdbf784b93208ffcb *R/helpers_discrete_discover.R
67f83225118e9b3758a9d51408273188 *R/helpers_lm_meta.R
52257fd90c38412e4f909731a0addfec *R/lm_meta.R
11f24451d5d7953e775d9cbf8120c256 *R/vaginal_abd-data.R
b607a8fb0837b77d376345d198d924f6 *R/vaginal_meta-data.R
a11adbd01282395641ea6f1b663b558b *R/vignette_prep.R
f7ea0cf93fea633d94c67dfe2fcbd982 *build/vignette.rds
98e284d09831d766fa1f7f588aa2948e *data/CRC_abd.RData
47607cfd265889e9214a9d016e780342 *data/CRC_meta.RData
a42d792d27d9503f6f8ecb00a076ad0c *data/vaginal_abd.RData
6b41e2f7ad73352ed7640c7345ca119d *data/vaginal_meta.RData
20cdc46690dd5b5854de447f3dc6c2ce *inst/doc/MMUPHin.R
5e27d36167bbcc4738a997991f293e61 *inst/doc/MMUPHin.Rmd
4bb607a1e1ff25246a6495d6cac54cbe *inst/doc/MMUPHin.html
879143165ed1123b5082b2d4a38e33e6 *man/AST.Rd
9d935c3edd0b16a6bdcd3495a0d62b5b *man/CRC_abd.Rd
c39ed392e680480731276dc6ade0285a *man/CRC_meta.Rd
2101ed5816c7167dc6540b7a641267c0 *man/LOG.Rd
1853d7b364af78995234e7d3a13b6a2f *man/Maaslin2_wrapper.Rd
956f63bf7fe16f737f61959e83d2999d *man/add_back_covariates.Rd
40ac2077896adf6118d8fa8d32cb9fc1 *man/adjust_EB.Rd
c33eed1e771d9db4ca0e4587cf785436 *man/adjust_batch.Rd
15d7ecaf2d594055c0af95b2a94cd46e *man/aprior.Rd
c6974a149754cf59debabfdb75a635cb *man/back_transform_abd.Rd
bc3ca1d0c80ee55d0cce3421369cdcff *man/bprior.Rd
1bb17244cd88a485e8a756099283e388 *man/catchToList.Rd
e2c3759263fe3e44629a6ca0d2b5c3dd *man/check_D.Rd
c2dbeed71c956ed4c30807b7d483e7ae *man/check_batch.Rd
cbd5e2fa162382b5ee2859b607505fc7 *man/check_covariates.Rd
88593468b8c0886d3dd3538f30a0f71e *man/check_covariates_random.Rd
c037ff0db74549d2acf63eab9ad1e618 *man/check_exposure.Rd
8e62f2d59daca54878c79e79f6151a1d *man/check_feature_abd.Rd
bf9c4d4730cf703a4bfb291d6fc383fb *man/check_metadata.Rd
892ea4167c977ffdab236f25415c0ab2 *man/check_options.Rd
0a2ae69844b479f136420d022c644518 *man/check_options_continuous.Rd
15038a8e22679216a34f533e731d6ca2 *man/check_pseudo_count.Rd
8037da0641b19ac592d9a1b0f58ce636 *man/check_rank.Rd
7fbda048a02bba487bc1bb3d8181bff3 *man/check_samples.Rd
17191f6a4ac3e8bb8b181bd7c7c97e67 *man/check_samples_D.Rd
700ab6071d3aeb53594bfef8d54d80e1 *man/construct_design.Rd
1b18bc135d7aa29e8306e2a662bf354b *man/construct_ind.Rd
9f379b76e62c85c20716b2673acc1a7a *man/continuous_discover.Rd
d9f6dee08f5d91100c6ca29cbcf683e0 *man/create_table_maaslin.Rd
c0aade701f232f7a9ad2356dd4235aa3 *man/diagnostic_adjust_batch.Rd
d527834f17693e6f2535c26d6b593cd2 *man/diagnostic_continuous_discover.Rd
e33710b97b5e487933422c840be67cb1 *man/diagnostic_discrete_discover.Rd
b4f75b9ac17e039883f26c15a7b4f8fd *man/discrete_discover.Rd
cafab1354f74e2a3c6fb720d0d1d0b97 *man/figures/adj_batch_example.png
0808f4ce638d5995a56857a506aaa89f *man/figures/structure_types.PNG
5bdd52b65e3ae9269aff3b162cbd89c0 *man/fill_dimnames.Rd
12552fa00317c1a1e1d82684c4a893a4 *man/fit_EB.Rd
c386f1c8769c6fc353527baddd01640c *man/fit_shrink.Rd
9b076c76b8db37f58e032d5ef4812eab *man/fit_stand_feature.Rd
9ad97dc584c084005d2797c1812204d9 *man/it_sol.Rd
1d80ee84b253e5c6852a45518b6e36b6 *man/lm_meta.Rd
4fc07016464653809a04975b0736325c *man/match_control.Rd
6ff3ba43141783441e237210b79bc32d *man/normalize_features.Rd
71d7e6396fce8f0bc76933878b51ed9f *man/relocate_scale.Rd
29fa7410469066750011e78563273cce *man/rename_maaslin.Rd
7a22dbd916a296239440ced085265c2c *man/rma_wrapper.Rd
309bdfc0e5f8ba0485269b122e4f8265 *man/set_pseudo.Rd
ed6e211fb17a265842cca0c5ba1650ad *man/shorten_name.Rd
dc14c8a47bc73e32aad09b6ea2232c3a *man/standardize_feature.Rd
af25c5bc64761807244c4dd3d95a4315 *man/transform_features.Rd
1cd90220325422b66797c647daa35f97 *man/tss.Rd
c474c1a4798ea91cec85e7d5bf84d3ec *man/vaginal_abd.Rd
02cfa99f37c327cc962c0be25103a71b *man/vaginal_meta.Rd
7a8a42dee71898dc3e75ee4822750e81 *man/visualize_continuous_discover.Rd
1a736b10c9f4f51b19cd18ff6032089f *tests/testthat.R
7321dfcc283f53371c6a09ff997eb7ab *tests/testthat/test-helpers.R
3aae2c1217c2224f63525e246a1cf8be *tests/testthat/test-helpers_adjust_batch.R
efd0912dcb2f55fbfaf3db0377680fe6 *tests/testthat/test-helpers_lm_meta.R
5e27d36167bbcc4738a997991f293e61 *vignettes/MMUPHin.Rmd
2b613d0d5a895218d8c3532878ec3a85 *vignettes/references.bib
