VectraPolarisData
This package is for version 3.19 of Bioconductor; for the stable, up-to-date release version, see VectraPolarisData.
Vectra Polaris and Vectra 3 multiplex single-cell imaging data
Bioconductor version: 3.19
Provides two multiplex imaging datasets collected on Vectra instruments at the University of Colorado Anschutz Medical Campus. Data are provided as a Spatial Experiment objects. Data is provided in tabular form and has been segmented and phenotyped using Inform software. Raw .tiff files are not included.
Author: Wrobel Julia [aut, cre] 
, Tusharkanti Ghosh [aut]
Maintainer: Wrobel Julia <julia.wrobel at cuanschutz.edu>
citation("VectraPolarisData")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("VectraPolarisData")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("VectraPolarisData")| VectraPolarisData | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | ExperimentData, ExperimentHub, Homo_sapiens_Data, ReproducibleResearch, SingleCellData, SpatialData |
| Version | 1.8.0 |
| License | Artistic-2.0 |
| Depends | ExperimentHub, SpatialExperiment, utils |
| Imports | |
| System Requirements | |
| URL | https://github.com/julia-wrobel/VectraPolarisData |
| Bug Reports | https://support.bioconductor.org/t/VectraPolarisData |
See More
| Suggests | BiocStyle, knitr, rmarkdown, dplyr |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | VectraPolarisData_1.8.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/VectraPolarisData |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/VectraPolarisData |
| Package Short Url | https://bioconductor.org/packages/VectraPolarisData/ |
| Package Downloads Report | Download Stats |