FoldGO
This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.
This package is for version 3.19 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see FoldGO.
Package for Fold-specific GO Terms Recognition
Bioconductor version: 3.19
FoldGO is a package designed to annotate gene sets derived from expression experiments and identify fold-change-specific GO terms.
Author: Daniil Wiebe <daniil.wiebe at gmail.com> [aut, cre]
Maintainer: Daniil Wiebe <daniil.wiebe at gmail.com>
citation("FoldGO")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("FoldGO")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | DifferentialExpression, GO, GeneExpression, Software |
| Version | 1.22.0 |
| In Bioconductor since | BioC 3.8 (R-3.5) (6 years) |
| License | GPL-3 |
| Depends | R (>= 4.0) |
| Imports | topGO(>= 2.30.1), ggplot2 (>= 2.2.1), tidyr (>= 0.8.0), stats, methods |
| System Requirements | |
| URL |
See More
| Suggests | knitr, rmarkdown, devtools, kableExtra |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | |
| Windows Binary (x86_64) | FoldGO_1.22.0.zip |
| macOS Binary (x86_64) | FoldGO_1.22.0.tgz |
| macOS Binary (arm64) | FoldGO_1.22.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/FoldGO |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/FoldGO |
| Package Short Url | https://bioconductor.org/packages/FoldGO/ |
| Package Downloads Report | Download Stats |