sscore
This package is for version 3.17 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see sscore.
S-Score Algorithm for Affymetrix Oligonucleotide Microarrays
Bioconductor version: 3.17
This package contains an implementation of the S-Score algorithm as described by Zhang et al (2002).
Author: Richard Kennedy <rkennedy at ms.soph.uab.edu>, based on C++ code from Li Zhang <zhangli at odin.mdacc.tmc.edu> and Borland Delphi code from Robnet Kerns <rtkerns at vcu.edu>.
Maintainer: Richard Kennedy <rkennedy at ms.soph.uab.edu>
citation("sscore")):
Installation
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("sscore")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("sscore")| SScore primer | R Script | |
| Reference Manual |
Details
| biocViews | DifferentialExpression, Software |
| Version | 1.72.0 |
| In Bioconductor since | BioC 1.8 (R-2.3) (18 years) |
| License | GPL (>= 2) |
| Depends | R (>= 1.8.0), affy, affyio |
| Imports | |
| System Requirements | |
| URL | http://home.att.net/~richard-kennedy/professional.html |
See More
| Suggests | affydata |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | sscore_1.72.0.tar.gz |
| Windows Binary | sscore_1.72.0.zip |
| macOS Binary (x86_64) | sscore_1.72.0.tgz |
| macOS Binary (arm64) | sscore_1.72.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/sscore |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/sscore |
| Bioc Package Browser | https://code.bioconductor.org/browse/sscore/ |
| Package Short Url | https://bioconductor.org/packages/sscore/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.17 | Source Archive |