crisprVerse
This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see crisprVerse.
Easily install and load the crisprVerse ecosystem for CRISPR gRNA design
Bioconductor version: 3.17
The crisprVerse is a modular ecosystem of R packages developed for the design and manipulation of CRISPR guide RNAs (gRNAs). All packages share a common language and design principles. This package is designed to make it easy to install and load the crisprVerse packages in a single step. To learn more about the crisprVerse, visit
Author: Jean-Philippe Fortin [aut, cre]
Maintainer: Jean-Philippe Fortin <fortin946 at gmail.com>
citation("crisprVerse")):
Installation
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("crisprVerse")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("crisprVerse")| crisprVerse | HTML | R Script |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | CRISPR, FunctionalGenomics, GeneTarget, Software |
| Version | 1.2.0 |
| In Bioconductor since | BioC 3.16 (R-4.2) (1.5 years) |
| License | MIT + file LICENSE |
| Depends | R (>= 4.2.0) |
| Imports | BiocManager, cli, crisprBase, crisprBowtie, crisprScore, crisprScoreData, crisprDesign, crisprViz, rlang, tools, utils |
| System Requirements | |
| URL | https://github.com/crisprVerse/crisprVerse |
| Bug Reports | https://github.com/crisprVerse/crisprVerse/issues |
See More
| Suggests | BiocStyle, knitr, testthat |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | crisprVerse_1.2.0.tar.gz |
| Windows Binary | crisprVerse_1.2.0.zip |
| macOS Binary (x86_64) | crisprVerse_1.2.0.tgz |
| macOS Binary (arm64) | crisprVerse_1.2.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/crisprVerse |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/crisprVerse |
| Bioc Package Browser | https://code.bioconductor.org/browse/crisprVerse/ |
| Package Short Url | https://bioconductor.org/packages/crisprVerse/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.17 | Source Archive |