RandomWalkRestartMH
This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see RandomWalkRestartMH.
Random walk with restart on multiplex and heterogeneous Networks
Bioconductor version: 3.17
This package performs Random Walk with Restart on multiplex and heterogeneous networks. It is described in the following article: "Random Walk With Restart On Multiplex And Heterogeneous Biological Networks"
Author: Alberto Valdeolivas [cre, aut, ctb] 
Maintainer: Alberto Valdeolivas <alvaldeolivas at gmail.com>
citation("RandomWalkRestartMH")):
Installation
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("RandomWalkRestartMH")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("RandomWalkRestartMH")| Random Walk with Restart on Multiplex and Heterogeneous Network | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | BioCarta, BiomedicalInformatics, GenePrediction, GraphAndNetwork, KEGG, MathematicalBiology, Network, NetworkInference, Pathways, Reactome, Software, SomaticMutation, SystemsBiology |
| Version | 1.20.0 |
| In Bioconductor since | BioC 3.7 (R-3.5) (6 years) |
| License | GPL (>= 2) |
| Depends | R (>= 3.5.0) |
| Imports | igraph, Matrix, dnet, methods |
| System Requirements | |
| URL | https://github.com/alberto-valdeolivas/RandomWalkRestartMH |
| Bug Reports | https://github.com/alberto-valdeolivas/RandomWalkRestartMH/issues |
See More
| Suggests | BiocStyle, knitr, rmarkdown, testthat |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | netOmics |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | RandomWalkRestartMH_1.20.0.tar.gz |
| Windows Binary | RandomWalkRestartMH_1.20.0.zip |
| macOS Binary (x86_64) | RandomWalkRestartMH_1.20.0.tgz |
| macOS Binary (arm64) | RandomWalkRestartMH_1.20.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/RandomWalkRestartMH |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/RandomWalkRestartMH |
| Bioc Package Browser | https://code.bioconductor.org/browse/RandomWalkRestartMH/ |
| Package Short Url | https://bioconductor.org/packages/RandomWalkRestartMH/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.17 | Source Archive |