BEAT
This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see BEAT.
BEAT - BS-Seq Epimutation Analysis Toolkit
Bioconductor version: 3.17
Model-based analysis of single-cell methylation data
Author: Kemal Akman <akman at mpipz.mpg.de>
Maintainer: Kemal Akman <akman at mpipz.mpg.de>
Citation (from within R, enter
citation("BEAT")
):
Installation
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("BEAT")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("BEAT")
Analysing single-cell BS-Seq data with the "BEAT" package | R Script | |
Reference Manual |
Details
biocViews | DNAMethylation, Epigenetics, Genetics, ImmunoOncology, MethylSeq, Software |
Version | 1.38.0 |
In Bioconductor since | BioC 2.14 (R-3.1) (10 years) |
License | LGPL (>= 3.0) |
Depends | R (>= 2.13.0) |
Imports | GenomicRanges, ShortRead, Biostrings, BSgenome |
System Requirements | |
URL |
See More
Suggests | |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | BEAT_1.38.0.tar.gz |
Windows Binary | BEAT_1.38.0.zip |
macOS Binary (x86_64) | BEAT_1.38.0.tgz |
macOS Binary (arm64) | BEAT_1.38.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/BEAT |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/BEAT |
Bioc Package Browser | https://code.bioconductor.org/browse/BEAT/ |
Package Short Url | https://bioconductor.org/packages/BEAT/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.17 | Source Archive |