Menu

MafH5.gnomAD.v3.1.1.GRCh38

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see MafH5.gnomAD.v3.1.1.GRCh38.

Minor allele frequency data from gnomAD version 3.1.1 for GRCh38


Bioconductor version: 3.16

Store minor allele frequency data from the Genome Aggregation Database (gnomAD version 3.1.1) for the human genome version GRCh38.

Author: Robert Castelo

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Citation (from within R, enter citation("MafH5.gnomAD.v3.1.1.GRCh38")):

Installation

To install this package, start R (version "4.2") and enter: 


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MafH5.gnomAD.v3.1.1.GRCh38")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF
NEWS Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews AnnotationData, Genetics, GenomicScores, Homo_sapiens
Version 3.13.1
License Artistic-2.0
Depends R (>= 4.0.0), GenomicScores(>= 2.3.4)
Imports utils, S4Vectors, IRanges, GenomicRanges, GenomeInfoDb, BSgenome, rhdf5, HDF5Array
System Requirements
URL
See More
Suggests SNPlocs.Hsapiens.dbSNP149.GRCh38
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MafH5.gnomAD.v3.1.1.GRCh38_3.13.1.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url https://bioconductor.org/packages/MafH5.gnomAD.v3.1.1.GRCh38/
Package Downloads Report Download Stats