Menu

RSeqAn

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see RSeqAn.

R SeqAn


Bioconductor version: 3.16

Headers and some wrapper functions from the SeqAn C++ library for ease of usage in R.

Author: August Guang [aut, cre]

Maintainer: August Guang <august.guang at gmail.com>

Citation (from within R, enter citation("RSeqAn")):

Installation

To install this package, start R (version "4.2") and enter: 


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("RSeqAn")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RSeqAn")
Introduction to Using RSeqAn HTML R Script
Reference Manual PDF
NEWS Text
LICENSE Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews Infrastructure, Software
Version 1.18.0
In Bioconductor since BioC 3.7 (R-3.5) (6 years)
License BSD_3_clause + file LICENSE
Depends
Imports Rcpp
System Requirements
URL
Bug Reports https://github.com/compbiocore/RSeqAn/issues
See More
Suggests knitr, rmarkdown, testthat
Linking To Rcpp
Enhances
Depends On Me
Imports Me qckitfastq
Suggests Me
Links To Me qckitfastq
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package RSeqAn_1.18.0.tar.gz
Windows Binary RSeqAn_1.18.0.zip
macOS Binary (x86_64) RSeqAn_1.18.0.tgz
macOS Binary (arm64) RSeqAn_1.18.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/RSeqAn
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/RSeqAn
Bioc Package Browser https://code.bioconductor.org/browse/RSeqAn/
Package Short Url https://bioconductor.org/packages/RSeqAn/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.16 Source Archive