Clonality
This package is for version 3.16 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see Clonality.
Clonality testing
Bioconductor version: 3.16
Statistical tests for clonality versus independence of tumors from the same patient based on their LOH or genomewide copy number profiles
Author: Irina Ostrovnaya
Maintainer: Irina Ostrovnaya <ostrovni at mskcc.org>
citation("Clonality")
):
Installation
To install this package, start R (version "4.2") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("Clonality")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("Clonality")
Clonality | R Script | |
Reference Manual |
Details
biocViews | Classification, CopyNumber, Diagnosis, Mutations, Software, aCGH, metastasis |
Version | 1.46.0 |
In Bioconductor since | BioC 2.8 (R-2.13) (13 years) |
License | GPL-3 |
Depends | R (>= 2.12.2), DNAcopy |
Imports | grDevices, graphics, stats, utils |
System Requirements | |
URL |
See More
Suggests | gdata |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | Clonality_1.46.0.tar.gz |
Windows Binary | Clonality_1.46.0.zip |
macOS Binary (x86_64) | Clonality_1.46.0.tgz |
macOS Binary (arm64) | Clonality_1.46.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/Clonality |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/Clonality |
Bioc Package Browser | https://code.bioconductor.org/browse/Clonality/ |
Package Short Url | https://bioconductor.org/packages/Clonality/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.16 | Source Archive |