CNORode

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see CNORode.

ODE add-on to CellNOptR

Bioconductor version: 3.16

Logic based ordinary differential equation (ODE) add-on to CellNOptR.

Author: David Henriques, Thomas Cokelaer, Attila Gabor, Federica Eduati, Enio Gjerga

Maintainer: Attila Gabor <attila.gabor at uni-heidelberg.de>

Citation (from within R, enter citation("CNORode")):

To install this package, start R (version "4.2") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("CNORode")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("CNORode")

Training Signalling Pathway Maps to Biochemical Data with Logic-Based Ordinary Differential Equations	PDF	R Script
Reference Manual	PDF
NEWS	Text

biocViews	Bioinformatics, CellBasedAssays, CellBiology, ImmunoOncology, Proteomics, Software, TimeCourse
Version	1.40.0
In Bioconductor since	BioC 2.11 (R-2.15) (11.5 years)
License	GPL-2
Depends	CellNOptR, genalg, knitr
Imports
System Requirements
URL

Follow Installation instructions to use this package in your R session.

Source Package	CNORode_1.40.0.tar.gz
Windows Binary	CNORode_1.40.0.zip (64-bit only)
macOS Binary (x86_64)	CNORode_1.40.0.tgz
macOS Binary (arm64)	CNORode_1.40.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/CNORode
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/CNORode
Bioc Package Browser	https://code.bioconductor.org/browse/CNORode/
Package Short Url	https://bioconductor.org/packages/CNORode/
Package Downloads Report	Download Stats
Old Source Packages for BioC 3.16	Source Archive