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PhyloProfileData

This package is for version 3.15 of Bioconductor; for the stable, up-to-date release version, see PhyloProfileData.

Data package for phylogenetic profile analysis using PhyloProfile tool


Bioconductor version: 3.15

Two experimental datasets to illustrate running and analysing phylogenetic profiles with PhyloProfile package.

Author: Vinh Tran [aut, cre], Ingo Ebersberger [aut], Hannah Mülbaier [ctb], Arpit Jain [ctb]

Maintainer: Vinh Tran <tran at bio.uni-frankfurt.de>

Citation (from within R, enter citation("PhyloProfileData")):

Installation

To install this package, start R (version "4.2") and enter: 


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("PhyloProfileData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("PhyloProfileData")
PhyloProfileData HTML R Script
Reference Manual PDF
NEWS Text
LICENSE Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews ExperimentData, ExperimentHub, ReproducibleResearch
Version 1.10.0
License MIT + file LICENSE
Depends R (>= 4.1.0)
Imports ExperimentHub, Biostrings, BiocStyle
System Requirements
URL https://github.com/BIONF/PhyloProfileData
Bug Reports https://github.com/trvinh/PhyloProfileData/issues
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Suggests knitr, rmarkdown, markdown
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package PhyloProfileData_1.10.0.tar.gz
Windows Binary
macOS Binary (x86_64)
Source Repository git clone https://git.bioconductor.org/packages/PhyloProfileData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/PhyloProfileData
Package Short Url https://bioconductor.org/packages/PhyloProfileData/
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