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MetaGxBreast

This package is for version 3.15 of Bioconductor; for the stable, up-to-date release version, see MetaGxBreast.

Transcriptomic Breast Cancer Datasets


Bioconductor version: 3.15

A collection of Breast Cancer Transcriptomic Datasets that are part of the MetaGxData package compendium.

Author: Michael Zon [aut], Deena M.A. Gendoo [aut], Christopher Eeles [ctb], Benjamin Haibe-Kains [aut, cre]

Maintainer: Benjamin Haibe-Kains <benjamin.haibe.kains at utoronto.ca>

Citation (from within R, enter citation("MetaGxBreast")):

Installation

To install this package, start R (version "4.2") and enter: 


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MetaGxBreast")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MetaGxBreast")
MetaGxBreast: a package for breast cancer gene expression analysis PDF R Script
Reference Manual PDF
NEWS Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews ArrayExpress, CancerData, ExperimentData, ExperimentHub, ExpressionData, GEO, Homo_sapiens_Data, MicroarrayData, NCI
Version 1.16.0
License Apache License (>= 2)
Depends R (>= 3.6.0), Biobase, AnnotationHub, ExperimentHub
Imports stats, lattice, impute, SummarizedExperiment
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Suggests testthat, xtable, tinytex
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MetaGxBreast_1.16.0.tar.gz
Windows Binary
macOS Binary (x86_64)
Source Repository git clone https://git.bioconductor.org/packages/MetaGxBreast
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/MetaGxBreast
Package Short Url https://bioconductor.org/packages/MetaGxBreast/
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