Changes in version 0.99.13
o Adjusted SVD code to more straightforward implementation.
o Fixed variable ordering for LM-variance calculations.
Changes in version 0.99.12
o Reduced size of data-sets in testing procedures to stop
unit-test timeouts.
o Added examples to data objects and reporting functions.
Changes in version 0.99.11
o Cleaned repository.
o GitHub Readme includes Installation instructions and brief
workflow tutorial.
Changes in version 0.99.10
o Added BiocViews: ReportWriting, Visualization, Normalization
and QualityControl.
o Inlcuded 'importFrom' for all ggplot2 functionality.
o Required packages now live in Imports section.
o Switched to 'aes_string' to remove visible binding NOTEs in
plot functions.
o Included local variables to shut up the remaining NOTEs.
o Moved 'match.arg' choices to function heads.
o Moved code for generation of mock-up dummy-data from data-raw
into the data.R file.
o Added testing for dummy data.
o Fixed highlighting in vignette.
o Fixed gray-area issue in box-plots.
Changes in version 0.99.8
o Included NEWS file.
o Added Bioconductor installation instructions in vignette.
o Added package man-page.
o Set lazyData to false.
o Added URL and BugReports fields to Description.
o Remove bapred and permute packages from suggest because they
are no longer required.
o Also removed pals package, but included reference because I use
the tableau color-scheme.
o All packages that are required for execution are now 'Depends'
instead of 'Suggests'.
o Revised vignette content, formatting and spelling for more
convenient user experience.
o Fixed test for percentile normalization to actually test
PN-function.
o Prelim report now checks if clr/tss transformed values are
present prior to calculating them.
o Report-names/directories can now be changed from default by
user.
o Reporting functions included in testing.
o Formatted code to adhere to 4-space indentation and 80
characters width requirements. For the most part.
o Included code for generation of dummy-data.