ANF
This package is for version 3.15 of Bioconductor; for the stable, up-to-date release version, see ANF.
Affinity Network Fusion for Complex Patient Clustering
Bioconductor version: 3.15
This package is used for complex patient clustering by integrating multi-omic data through affinity network fusion.
Author: Tianle Ma, Aidong Zhang
Maintainer: Tianle Ma <tianlema at buffalo.edu>
Citation (from within R, enter
citation("ANF")
):
Installation
To install this package, start R (version "4.2") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ANF")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ANF")
Cancer Patient Clustering with ANF | HTML | R Script |
Reference Manual | ||
NEWS | Text |
Details
biocViews | Clustering, GraphAndNetwork, Network, Software |
Version | 1.18.0 |
In Bioconductor since | BioC 3.6 (R-3.4) (6.5 years) |
License | GPL-3 |
Depends | |
Imports | igraph, Biobase, survival, MASS, stats, RColorBrewer |
System Requirements | |
URL |
See More
Suggests | ExperimentHub, SNFtool, knitr, rmarkdown, testthat |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | HarmonizedTCGAData |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | ANF_1.18.0.tar.gz |
Windows Binary | ANF_1.18.0.zip |
macOS Binary (x86_64) | ANF_1.18.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/ANF |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/ANF |
Bioc Package Browser | https://code.bioconductor.org/browse/ANF/ |
Package Short Url | https://bioconductor.org/packages/ANF/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.15 | Source Archive |