mcsurvdata
This package is for version 3.12 of Bioconductor; for the stable, up-to-date release version, see mcsurvdata.
Meta cohort survival data
Bioconductor version: 3.12
This package stores two merged expressionSet objects that contain the gene expression profile and clinical information of -a- six breast cancer cohorts and -b- four colorectal cancer cohorts. Breast cancer data are employed in the vignette of the hrunbiased package for survival analysis of gene signatures.
Author: Adria Caballe Mestres [aut, cre], Antoni Berenguer Llergo [aut], Camille Stephan-Otto Attolini [aut]
Maintainer: Adria Caballe Mestres <adria.caballe at irbbarcelona.org>
citation("mcsurvdata")):
Installation
To install this package, start R (version "4.0") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("mcsurvdata")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("mcsurvdata")| analysis vignette | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | ExperimentData, GEO, Homo_sapiens_Data, MicroarrayData |
| Version | 1.8.0 |
| License | GPL (>=2) |
| Depends | R (>= 3.5), ExperimentHub |
| Imports | AnnotationHub, Biobase |
| System Requirements | |
| URL | https://github.com/adricaba/mcsurvdata |
See More
| Suggests | knitr |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | mcsurvdata_1.8.0.tar.gz |
| Windows Binary | |
| macOS 10.13 (High Sierra) | |
| Source Repository | git clone https://git.bioconductor.org/packages/mcsurvdata |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/mcsurvdata |
| Package Short Url | https://bioconductor.org/packages/mcsurvdata/ |
| Package Downloads Report | Download Stats |