tscR
This package is for version 3.12 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see tscR.
A time series clustering package combining slope and Frechet distances
Bioconductor version: 3.12
Clustering for time series data using slope distance and/or shape distance.
Author: Miriam Riquelme-Pérez and Fernando Pérez-Sanz
Maintainer: Pérez-Sanz, Fernando <fernando.perez8 at um.es>
Citation (from within R, enter
citation("tscR")):
Installation
To install this package, start R (version "4.0") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("tscR")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("tscR")| tscR | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | Clustering, DNAMethylation, GeneExpression, Microarray, Software |
| Version | 1.2.0 |
| In Bioconductor since | BioC 3.11 (R-4.0) (4 years) |
| License | GPL (>=2) |
| Depends | R (>= 4.0), dplyr |
| Imports | gridExtra, methods, dtw, class, kmlShape, graphics, cluster, RColorBrewer, grDevices, knitr, rmarkdown, prettydoc, grid, ggplot2, latex2exp, stats, SummarizedExperiment, GenomicRanges, IRanges, S4Vectors |
| System Requirements | |
| URL |
See More
| Suggests | testthat |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | tscR_1.2.0.tar.gz |
| Windows Binary | tscR_1.2.0.zip (32- & 64-bit) |
| macOS 10.13 (High Sierra) | tscR_1.2.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/tscR |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/tscR |
| Bioc Package Browser | https://code.bioconductor.org/browse/tscR/ |
| Package Short Url | https://bioconductor.org/packages/tscR/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.12 | Source Archive |