Mirsynergy
This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.
This package is for version 3.12 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see Mirsynergy.
Mirsynergy
Bioconductor version: 3.12
Detect synergistic miRNA regulatory modules by overlapping neighbourhood expansion.
Author: Yue Li
Maintainer: Yue Li <yueli at cs.toronto.edu>
citation("Mirsynergy")):
Installation
To install this package, start R (version "4.0") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("Mirsynergy")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | Clustering, Software |
| Version | 1.26.0 |
| In Bioconductor since | BioC 2.14 (R-3.1) (10 years) |
| License | GPL-2 |
| Depends | R (>= 3.0.2), igraph, ggplot2 |
| Imports | graphics, grDevices, gridExtra, Matrix, parallel, RColorBrewer, reshape, scales, utils |
| System Requirements | |
| URL | http://www.cs.utoronto.ca/~yueli/Mirsynergy.html |
See More
| Suggests | glmnet, RUnit, BiocGenerics, knitr |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | |
| Windows Binary | |
| macOS 10.13 (High Sierra) | |
| Source Repository | git clone https://git.bioconductor.org/packages/Mirsynergy |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/Mirsynergy |
| Package Short Url | https://bioconductor.org/packages/Mirsynergy/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.12 | Source Archive |