BiocDockerManager
This package is for version 3.12 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see BiocDockerManager.
Access Bioconductor docker images
Bioconductor version: 3.12
Package works analogous to BiocManager but for docker images. Use the BiocDockerManager package to install and manage docker images provided by the Bioconductor project. A convenient package to install images, update images and find which Bioconductor based docker images are available.
Author: Bioconductor Package Maintainer [cre], Nitesh Turaga [aut]
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
citation("BiocDockerManager")):
Installation
To install this package, start R (version "4.0") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("BiocDockerManager")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("BiocDockerManager")| BiocDockerManager Vignette | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | Infrastructure, Software, ThirdPartyClient |
| Version | 1.2.1 |
| In Bioconductor since | BioC 3.11 (R-4.0) (4 years) |
| License | Artistic-2.0 |
| Depends | R (>= 4.0) |
| Imports | httr, whisker, readr, dplyr, utils, methods, memoise |
| System Requirements | docker |
| URL | |
| Bug Reports | https://github.com/Bioconductor/BiocDockerManager/issues |
See More
| Suggests | BiocStyle, knitr, rmarkdown, testthat (>= 2.1.0) |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | BiocDockerManager_1.2.1.tar.gz |
| Windows Binary | BiocDockerManager_1.2.1.zip |
| macOS 10.13 (High Sierra) | BiocDockerManager_1.2.1.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/BiocDockerManager |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/BiocDockerManager |
| Bioc Package Browser | https://code.bioconductor.org/browse/BiocDockerManager/ |
| Package Short Url | https://bioconductor.org/packages/BiocDockerManager/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.12 | Source Archive |