gpaExample
This package is for version 3.11 of Bioconductor; for the stable, up-to-date release version, see gpaExample.
Example data for the GPA package (Genetic analysis incorporating Pleiotropy and Annotation)
Bioconductor version: 3.11
Example data for the GPA package, consisting of the p-values of 1,219,805 SNPs for five psychiatric disorder GWAS from the psychiatric GWAS consortium (PGC), with the annotation data using genes preferentially expressed in the central nervous system (CNS).
Author: Dongjun Chung, Carter Allen
Maintainer: Dongjun Chung <dongjun.chung at gmail.com>
Citation (from within R, enter
citation("gpaExample")):
Installation
To install this package, start R (version "4.0") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("gpaExample")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | ExperimentData, Homo_sapiens_Data, SNPData |
| Version | 1.0.0 |
| License | GPL (>= 2) |
| Depends | R (>= 4.0.0) |
| Imports | |
| System Requirements | |
| URL | http://dongjunchung.github.io/GPA/ |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | GPA |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | gpaExample_1.0.0.tar.gz |
| Windows Binary | |
| macOS 10.13 (High Sierra) | |
| Source Repository | git clone https://git.bioconductor.org/packages/gpaExample |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/gpaExample |
| Package Short Url | https://bioconductor.org/packages/gpaExample/ |
| Package Downloads Report | Download Stats |