OpenStats
This package is for version 3.11 of Bioconductor; for the stable, up-to-date release version, see OpenStats.
A Robust and Scalable Software Package for Reproducible Analysis of High-Throughput genotype-phenotype association
Bioconductor version: 3.11
Package contains several methods for statistical analysis of genotype to phenotype association in high-throughput screening pipelines.
Author: Hamed Haseli Mashhadi
Maintainer: Hamed Haseli Mashhadi <hamedhm at ebi.ac.uk>
Citation (from within R, enter
citation("OpenStats")):
Installation
To install this package, start R (version "4.0") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("OpenStats")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("OpenStats")| OpenStats | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | BatchEffect, Bayesian, Software, StatisticalMethod |
| Version | 1.0.2 |
| In Bioconductor since | BioC 3.11 (R-4.0) (4 years) |
| License | GPL (>= 2) |
| Depends | nlme |
| Imports | MASS, jsonlite, Hmisc, methods, knitr, AICcmodavg, car, rlist, summarytools, graphics, stats, utils |
| System Requirements | |
| URL | https://git.io/Jv5w0 |
| Bug Reports | https://git.io/Jv5wg |
See More
| Suggests | rmarkdown |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | OpenStats_1.0.2.tar.gz |
| Windows Binary | OpenStats_1.0.2.zip |
| macOS 10.13 (High Sierra) | OpenStats_1.0.2.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/OpenStats |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/OpenStats |
| Bioc Package Browser | https://code.bioconductor.org/browse/OpenStats/ |
| Package Short Url | https://bioconductor.org/packages/OpenStats/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.11 | Source Archive |