MIMOSA
This package is for version 3.11 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see MIMOSA.
Mixture Models for Single-Cell Assays
Bioconductor version: 3.11
Modeling count data using Dirichlet-multinomial and beta-binomial mixtures with applications to single-cell assays.
Author: Greg Finak <gfinak at fhcrc.org>
Maintainer: Greg Finak <gfinak at fhcrc.org>
Citation (from within R, enter
citation("MIMOSA")):
Installation
To install this package, start R (version "4.0") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MIMOSA")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("MIMOSA")| MIMOSA: Mixture Models For Single Cell Assays | R Script | |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | CellBasedAssays, FlowCytometry, ImmunoOncology, Software |
| Version | 1.26.0 |
| In Bioconductor since | BioC 2.14 (R-3.1) (10 years) |
| License | MIT + file LICENSE |
| Depends | R (>= 3.0.2), MASS, plyr, reshape, Biobase, ggplot2 |
| Imports | methods, Formula, data.table, pracma, MCMCpack, coda, modeest, testthat, Rcpp, scales, dplyr, tidyr, rlang |
| System Requirements | |
| URL |
See More
| Suggests | parallel, knitr |
| Linking To | Rcpp, RcppArmadillo |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | MIMOSA_1.26.0.tar.gz |
| Windows Binary | MIMOSA_1.26.0.zip (32- & 64-bit) |
| macOS 10.13 (High Sierra) | MIMOSA_1.26.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/MIMOSA |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/MIMOSA |
| Bioc Package Browser | https://code.bioconductor.org/browse/MIMOSA/ |
| Package Short Url | https://bioconductor.org/packages/MIMOSA/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.11 | Source Archive |