GEOsubmission
This package is for version 3.11 of Bioconductor; for the stable, up-to-date release version, see GEOsubmission.
Prepares microarray data for submission to GEO
Bioconductor version: 3.11
Helps to easily submit a microarray dataset and the associated sample information to GEO by preparing a single file for upload (direct deposit).
Author: Alexandre Kuhn <alexandre.m.kuhn at gmail.com>
Maintainer: Alexandre Kuhn <alexandre.m.kuhn at gmail.com>
citation("GEOsubmission")):
Installation
To install this package, start R (version "4.0") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("GEOsubmission")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("GEOsubmission")| GEOsubmission Overview | R Script | |
| Reference Manual |
Details
| biocViews | Microarray, Software |
| Version | 1.40.0 |
| In Bioconductor since | BioC 2.6 (R-2.11) (14 years) |
| License | GPL (>= 2) |
| Depends | |
| Imports | affy, Biobase, utils |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | GEOsubmission_1.40.0.tar.gz |
| Windows Binary | GEOsubmission_1.40.0.zip |
| macOS 10.13 (High Sierra) | GEOsubmission_1.40.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/GEOsubmission |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/GEOsubmission |
| Bioc Package Browser | https://code.bioconductor.org/browse/GEOsubmission/ |
| Package Short Url | https://bioconductor.org/packages/GEOsubmission/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.11 | Source Archive |