curatedOvarianData
This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see curatedOvarianData.
Clinically Annotated Data for the Ovarian Cancer Transcriptome
Bioconductor version: 3.10
The curatedOvarianData package provides data for gene expression analysis in patients with ovarian cancer.
Author: Benjamin F. Ganzfried, Markus Riester, Steve Skates, Victoria Wang, Thomas Risch, Benjamin Haibe-Kains, Svitlana Tyekucheva, Jie Ding, Ina Jazic, Michael Birrer, Giovanni Parmigiani, Curtis Huttenhower, Levi Waldron
Maintainer: Levi Waldron <lwaldron.research at gmail.com>
citation("curatedOvarianData")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("curatedOvarianData")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("curatedOvarianData")| curatedOvarianData_vignette.pdf | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | CancerData, ExperimentData, MicroarrayData, OvarianCancerData, RNASeqData |
| Version | 1.24.0 |
| License | Artistic-2.0 |
| Depends | R (>= 2.10.0), affy |
| Imports | BiocGenerics |
| System Requirements | |
| URL | http://bcb.dfci.harvard.edu/ovariancancer |
See More
| Suggests | survival, RUnit, metafor, genefilter, logging, sva, xtable, futile.logger, BiocStyle |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | doppelgangR, simulatorZ |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | curatedOvarianData_1.24.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/curatedOvarianData |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/curatedOvarianData |
| Package Short Url | https://bioconductor.org/packages/curatedOvarianData/ |
| Package Downloads Report | Download Stats |