JASPAR2016
This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see JASPAR2016.
Data package for JASPAR 2016
Bioconductor version: 3.10
Data package for JASPAR 2016. To search this databases, please use the package TFBSTools (>= 1.8.1).
Author: Ge Tan <ge.tan09 at imperial.ac.uk>
Maintainer: Ge Tan <ge.tan09 at imperial.ac.uk>
Citation (from within R, enter
citation("JASPAR2016")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("JASPAR2016")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | ExperimentData, GeneRegulation, MotifAnnotation |
| Version | 1.14.0 |
| License | GPL-2 |
| Depends | R (>= 3.2.2), methods |
| Imports | |
| System Requirements | |
| URL | http://jaspar.genereg.net/ |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | esATAC |
| Suggests Me | CAGEWorkflow, chromVAR, TFBSTools |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | JASPAR2016_1.14.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/JASPAR2016 |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/JASPAR2016 |
| Package Short Url | https://bioconductor.org/packages/JASPAR2016/ |
| Package Downloads Report | Download Stats |