pwrEWAS
This package is for version 3.10 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see pwrEWAS.data.
A user-friendly tool for comprehensive power estimation for epigenome wide association studies (EWAS)
Bioconductor version: 3.10
pwrEWAS is a user-friendly tool to assists researchers in the design and planning of EWAS to help circumvent under- and overpowered studies.
Author: Stefan Graw
Maintainer: Stefan Graw <shgraw at uams.edu>
citation("pwrEWAS")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("pwrEWAS")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("pwrEWAS")| pwrEWAS User's Guide | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | DNAMethylation, DifferentialMethylation, Microarray, Software, TissueMicroarray |
| Version | 1.0.0 |
| In Bioconductor since | BioC 3.10 (R-3.6) (4.5 years) |
| License | Artistic-2.0 |
| Depends | shinyBS, foreach |
| Imports | doParallel, abind, truncnorm, CpGassoc, shiny, ggplot2, parallel, shinyWidgets, BiocManager, doSNOW, limma, genefilter, stats, grDevices, methods, utils, graphics, pwrEWAS.data |
| System Requirements | |
| URL |
See More
| Suggests | knitr, RUnit, BiocGenerics, rmarkdown |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | pwrEWAS_1.0.0.tar.gz |
| Windows Binary | pwrEWAS_1.0.0.zip |
| Mac OS X 10.11 (El Capitan) | pwrEWAS_1.0.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/pwrEWAS |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/pwrEWAS |
| Bioc Package Browser | https://code.bioconductor.org/browse/pwrEWAS/ |
| Package Short Url | https://bioconductor.org/packages/pwrEWAS/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.10 | Source Archive |